Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slx4Q6P1D7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Gm14726-201ENSMUST00000120623 896 ntBASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Gm18584-201ENSMUST00000203098 964 ntBASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slx4Q6P1D7 Gm26513-201ENSMUST00000181802 2489 ntBASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 AA914427-201ENSMUST00000193194 1166 ntBASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Gm4768-201ENSMUST00000206199 686 ntBASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slx4Q6P1D7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Snord83b-201ENSMUST00000104546 94 ntBASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Gm12217-201ENSMUST00000118858 696 ntBASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Gm18615-201ENSMUST00000222919 1031 ntBASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slx4Q6P1D7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Gm38049-201ENSMUST00000195698 1372 ntBASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slx4Q6P1D7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms