Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ParpbpQ6IRT3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ParpbpQ6IRT3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ParpbpQ6IRT3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ParpbpQ6IRT3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ParpbpQ6IRT3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Gm18027-201ENSMUST00000218947 619 ntBASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.98□□□□□ -0.33
ParpbpQ6IRT3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Gm9229-201ENSMUST00000222777 126 ntBASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ParpbpQ6IRT3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.96□□□□□ -0.33
ParpbpQ6IRT3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms