Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Gm17807-201ENSMUST00000186869 298 ntBASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Gm42829-201ENSMUST00000198417 2585 ntBASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop58Q6DFW4 Gm20554-201ENSMUST00000177421 2352 ntBASIC19■□□□□ 0.63
Nop58Q6DFW4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Gm13597-201ENSMUST00000121239 375 ntBASIC19■□□□□ 0.63
Nop58Q6DFW4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Gm27300-201ENSMUST00000184085 97 ntBASIC19■□□□□ 0.63
Nop58Q6DFW4 Gm27335-201ENSMUST00000184758 97 ntBASIC19■□□□□ 0.63
Nop58Q6DFW4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19■□□□□ 0.63
Nop58Q6DFW4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Gm42480-201ENSMUST00000198434 2595 ntBASIC19■□□□□ 0.63
Nop58Q6DFW4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nop58Q6DFW4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop58Q6DFW4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.99■□□□□ 0.63
Nop58Q6DFW4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop58Q6DFW4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nop58Q6DFW4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms