Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Proscos-202ENSMUST00000178990 666 ntBASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm29741-201ENSMUST00000192667 421 ntBASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm45880-201ENSMUST00000213041 853 ntBASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rftn1Q6A0D4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rftn1Q6A0D4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Gm10156-201ENSMUST00000122364 462 ntBASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Gm29705-201ENSMUST00000212598 474 ntBASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Gm24447-201ENSMUST00000083977 338 ntBASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rftn1Q6A0D4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rftn1Q6A0D4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms