Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.17□□□□□ -0.3
CishQ62225 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CishQ62225 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CishQ62225 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CishQ62225 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CishQ62225 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CishQ62225 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.16□□□□□ -0.3
CishQ62225 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.16□□□□□ -0.3
CishQ62225 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.16□□□□□ -0.3
CishQ62225 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CishQ62225 Gm12859-201ENSMUST00000117834 427 ntBASIC13.16□□□□□ -0.3
CishQ62225 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.16□□□□□ -0.3
CishQ62225 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CishQ62225 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.16□□□□□ -0.3
CishQ62225 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.16□□□□□ -0.3
CishQ62225 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.16□□□□□ -0.3
CishQ62225 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CishQ62225 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CishQ62225 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.15□□□□□ -0.3
CishQ62225 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CishQ62225 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.15□□□□□ -0.3
CishQ62225 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Gm5354-201ENSMUST00000182417 973 ntBASIC13.15□□□□□ -0.3
CishQ62225 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.15□□□□□ -0.3
CishQ62225 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.15□□□□□ -0.3
CishQ62225 Gm44719-201ENSMUST00000206404 149 ntBASIC13.15□□□□□ -0.3
CishQ62225 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Gm19220-201ENSMUST00000222682 803 ntBASIC13.15□□□□□ -0.3
CishQ62225 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CishQ62225 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CishQ62225 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.15□□□□□ -0.3
CishQ62225 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CishQ62225 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CishQ62225 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CishQ62225 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CishQ62225 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CishQ62225 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.14□□□□□ -0.31
CishQ62225 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CishQ62225 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CishQ62225 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CishQ62225 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms