Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC18.13■□□□□ 0.49
Gli3Q61602 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Gli3Q61602 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gli3Q61602 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gli3Q61602 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC18.13■□□□□ 0.49
Gli3Q61602 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC18.13■□□□□ 0.49
Gli3Q61602 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gli3Q61602 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gli3Q61602 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Gli3Q61602 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Gm15515-201ENSMUST00000117827 822 ntBASIC18.12■□□□□ 0.49
Gli3Q61602 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.12■□□□□ 0.49
Gli3Q61602 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gli3Q61602 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Gm45550-201ENSMUST00000209380 946 ntBASIC18.12■□□□□ 0.49
Gli3Q61602 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gli3Q61602 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.11■□□□□ 0.49
Gli3Q61602 AC101945.2-201ENSMUST00000227886 1377 ntBASIC18.11■□□□□ 0.49
Gli3Q61602 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Gm12165-201ENSMUST00000117047 342 ntBASIC18.11■□□□□ 0.49
Gli3Q61602 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.11■□□□□ 0.49
Gli3Q61602 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC18.11■□□□□ 0.49
Gli3Q61602 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.11■□□□□ 0.49
Gli3Q61602 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC18.11■□□□□ 0.49
Gli3Q61602 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gli3Q61602 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gli3Q61602 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Gli3Q61602 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Gli3Q61602 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Gli3Q61602 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.1■□□□□ 0.49
Gli3Q61602 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.1■□□□□ 0.49
Gli3Q61602 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC18.1■□□□□ 0.49
Gli3Q61602 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.1■□□□□ 0.49
Gli3Q61602 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gli3Q61602 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.1■□□□□ 0.49
Gli3Q61602 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.1■□□□□ 0.49
Gli3Q61602 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gli3Q61602 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.1■□□□□ 0.49
Gli3Q61602 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18.09■□□□□ 0.49
Gli3Q61602 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Gm37827-201ENSMUST00000194486 1542 ntBASIC18.09■□□□□ 0.49
Gli3Q61602 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gli3Q61602 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms