Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ClpbQ60649 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.26□□□□□ -0.29
ClpbQ60649 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.26□□□□□ -0.29
ClpbQ60649 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.26□□□□□ -0.29
ClpbQ60649 Gm15487-201ENSMUST00000122373 465 ntBASIC13.26□□□□□ -0.29
ClpbQ60649 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.26□□□□□ -0.29
ClpbQ60649 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ClpbQ60649 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ClpbQ60649 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.26□□□□□ -0.29
ClpbQ60649 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClpbQ60649 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Gm6916-202ENSMUST00000205523 195 ntBASIC13.26□□□□□ -0.29
ClpbQ60649 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.26□□□□□ -0.29
ClpbQ60649 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.26□□□□□ -0.29
ClpbQ60649 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClpbQ60649 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClpbQ60649 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.25□□□□□ -0.29
ClpbQ60649 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
ClpbQ60649 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.25□□□□□ -0.29
ClpbQ60649 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
ClpbQ60649 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Gm4875-201ENSMUST00000118257 786 ntBASIC13.25□□□□□ -0.29
ClpbQ60649 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.25□□□□□ -0.29
ClpbQ60649 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ClpbQ60649 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Gm33320-201ENSMUST00000192232 530 ntBASIC13.25□□□□□ -0.29
ClpbQ60649 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.25□□□□□ -0.29
ClpbQ60649 Gm43703-201ENSMUST00000200523 763 ntBASIC13.25□□□□□ -0.29
ClpbQ60649 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ClpbQ60649 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ClpbQ60649 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
ClpbQ60649 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
ClpbQ60649 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClpbQ60649 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
ClpbQ60649 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
ClpbQ60649 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.24□□□□□ -0.29
ClpbQ60649 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ClpbQ60649 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.24□□□□□ -0.29
ClpbQ60649 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ClpbQ60649 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.24□□□□□ -0.29
ClpbQ60649 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms