Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Mir698-201ENSMUST00000102164 109 ntBASIC13.21□□□□□ -0.29
Xrcc1Q60596 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.21□□□□□ -0.29
Xrcc1Q60596 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Xrcc1Q60596 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.21□□□□□ -0.3
Xrcc1Q60596 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.21□□□□□ -0.3
Xrcc1Q60596 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.2□□□□□ -0.3
Xrcc1Q60596 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Gm18905-201ENSMUST00000205454 928 ntBASIC13.2□□□□□ -0.3
Xrcc1Q60596 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.2□□□□□ -0.3
Xrcc1Q60596 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.2□□□□□ -0.3
Xrcc1Q60596 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xrcc1Q60596 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Xrcc1Q60596 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Gm12859-201ENSMUST00000117834 427 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Gm24420-201ENSMUST00000176676 59 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.19□□□□□ -0.3
Xrcc1Q60596 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.19□□□□□ -0.3
Xrcc1Q60596 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Xrcc1Q60596 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms