Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Trim38Q5SZ99 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Gm27618-201ENSMUST00000183671 60 ntBASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim38Q5SZ99 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm12585-201ENSMUST00000117307 290 ntBASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm13616-201ENSMUST00000120600 222 ntBASIC14.32□□□□□ -0.12
Trim38Q5SZ99 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm6888-201ENSMUST00000221983 706 ntBASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim38Q5SZ99 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Gm13453-201ENSMUST00000118708 357 ntBASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim38Q5SZ99 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms