Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm15483-201ENSMUST00000120338 456 ntBASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm28033-201ENSMUST00000184224 96 ntBASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm5177-201ENSMUST00000183092 997 ntBASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm27920-201ENSMUST00000183953 96 ntBASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms