Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC23.84■■□□□ 1.41
Trim41Q5NCC3 AC140406.1-201ENSMUST00000226481 465 ntBASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim41Q5NCC3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Ankra2-208ENSMUST00000226100 1476 ntBASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Trim41Q5NCC3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim41Q5NCC3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim41Q5NCC3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim41Q5NCC3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Gm22018-201ENSMUST00000104357 131 ntBASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Gm27320-201ENSMUST00000184892 109 ntBASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Gm9368-201ENSMUST00000219348 831 ntBASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Trim41Q5NCC3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Gm18935-201ENSMUST00000212692 664 ntBASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Gm13730-201ENSMUST00000121036 1462 ntBASIC23.81■■□□□ 1.4
Trim41Q5NCC3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm12846-201ENSMUST00000120431 1373 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm6407-201ENSMUST00000176468 549 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm6082-201ENSMUST00000215204 454 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 CT030182.1-201ENSMUST00000225935 533 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Trim41Q5NCC3 Gm45133-201ENSMUST00000207548 2773 ntBASIC23.8■■□□□ 1.4
Trim41Q5NCC3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Gm16177-201ENSMUST00000120728 718 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms