Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm12203-201ENSMUST00000118235 598 ntBASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm12209-201ENSMUST00000120089 596 ntBASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upf3aQ3ULJ3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Upf3aQ3ULJ3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upf3aQ3ULJ3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upf3aQ3ULJ3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upf3aQ3ULJ3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Upf3aQ3ULJ3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upf3aQ3ULJ3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gm15770-201ENSMUST00000117498 584 ntBASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upf3aQ3ULJ3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm2445-201ENSMUST00000182798 989 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm27682-201ENSMUST00000183930 110 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm6013-201ENSMUST00000212264 699 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm19309-201ENSMUST00000218295 205 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm26315-201ENSMUST00000083890 321 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms