Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Gm44719-201ENSMUST00000206404 149 ntBASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Brf2Q3UAW9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Brf2Q3UAW9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Gm11405-201ENSMUST00000118689 1556 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Gm14767-201ENSMUST00000121559 586 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13□□□□□ -0.33
Brf2Q3UAW9 Gm37171-201ENSMUST00000192636 1185 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 Gm44344-201ENSMUST00000200287 129 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Il17rd-203ENSMUST00000225146 3366 ntBASIC13□□□□□ -0.33
Brf2Q3UAW9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Brf2Q3UAW9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Brf2Q3UAW9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Gm15393-201ENSMUST00000120499 219 ntBASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms