Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim6Q3U0I6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm27357-201ENSMUST00000183754 135 ntBASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.69□□□□□ -0.7
Smim6Q3U0I6 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smim6Q3U0I6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Gm10154-201ENSMUST00000084445 354 ntBASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim6Q3U0I6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms