Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Rprl2-201ENSMUST00000157150 290 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm27397-201ENSMUST00000184997 107 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm37935-201ENSMUST00000192012 982 ntBASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm18057-201ENSMUST00000208220 503 ntBASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.78□□□□□ -0.52
Fndc4Q3TR08 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Rubie-203ENSMUST00000227803 2430 ntBASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fndc4Q3TR08 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Gm11745-201ENSMUST00000121669 448 ntBASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms