Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Khdc4Q3TCX3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Khdc4Q3TCX3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Khdc4Q3TCX3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Khdc4Q3TCX3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Gm45668-201ENSMUST00000211271 493 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 BC001981-202ENSMUST00000191393 1545 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Khdc4Q3TCX3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Khdc4Q3TCX3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Khdc4Q3TCX3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.15□□□□□ -0.31
Khdc4Q3TCX3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Khdc4Q3TCX3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm15460-201ENSMUST00000118147 391 ntBASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Gm18624-201ENSMUST00000220966 658 ntBASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms