Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Gm18165-201ENSMUST00000217426 928 ntBASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccbe1Q3MI99 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Olfr286-202ENSMUST00000205305 969 ntBASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccbe1Q3MI99 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccbe1Q3MI99 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms