Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptchd3Q0EEE2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ptchd3Q0EEE2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Ptchd3Q0EEE2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ptchd3Q0EEE2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ptchd3Q0EEE2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ptchd3Q0EEE2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Gm11543-201ENSMUST00000120758 370 ntBASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Gm11745-201ENSMUST00000121669 448 ntBASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptchd3Q0EEE2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms