Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.22□□□□□ -0.45
Chd8Q09XV5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Gm13035-201ENSMUST00000117496 342 ntBASIC12.21□□□□□ -0.45
Chd8Q09XV5 Gm5340-201ENSMUST00000203733 880 ntBASIC12.21□□□□□ -0.45
Chd8Q09XV5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd8Q09XV5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.21□□□□□ -0.46
Chd8Q09XV5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.21□□□□□ -0.46
Chd8Q09XV5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd8Q09XV5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.2□□□□□ -0.46
Chd8Q09XV5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Gm16372-201ENSMUST00000073088 450 ntBASIC12.2□□□□□ -0.46
Chd8Q09XV5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd8Q09XV5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.2□□□□□ -0.46
Chd8Q09XV5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.2□□□□□ -0.46
Chd8Q09XV5 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.2□□□□□ -0.46
Chd8Q09XV5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd8Q09XV5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms