Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.91□□□□□ -0.02
Col9a2Q07643 Mir3547-201ENSMUST00000175461 88 ntBASIC14.91□□□□□ -0.02
Col9a2Q07643 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm18062-201ENSMUST00000208020 547 ntBASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm18055-201ENSMUST00000208254 547 ntBASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.91□□□□□ -0.02
Col9a2Q07643 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col9a2Q07643 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Col9a2Q07643 Gm13612-201ENSMUST00000119276 390 ntBASIC14.9□□□□□ -0.02
Col9a2Q07643 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.9□□□□□ -0.02
Col9a2Q07643 Proscos-202ENSMUST00000178990 666 ntBASIC14.9□□□□□ -0.02
Col9a2Q07643 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.9□□□□□ -0.02
Col9a2Q07643 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.9□□□□□ -0.02
Col9a2Q07643 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.9□□□□□ -0.02
Col9a2Q07643 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col9a2Q07643 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm15824-201ENSMUST00000119516 955 ntBASIC14.89□□□□□ -0.03
Col9a2Q07643 Mir1982-201ENSMUST00000157368 74 ntBASIC14.89□□□□□ -0.03
Col9a2Q07643 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm38223-201ENSMUST00000194484 695 ntBASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm44397-201ENSMUST00000195950 113 ntBASIC14.89□□□□□ -0.03
Col9a2Q07643 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.89□□□□□ -0.03
Col9a2Q07643 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col9a2Q07643 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a2Q07643 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.89□□□□□ -0.03
Col9a2Q07643 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a2Q07643 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms