Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sox4Q06831 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox4Q06831 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox4Q06831 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.57□□□□□ -0.24
Sox4Q06831 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Sox4Q06831 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Sox4Q06831 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.57□□□□□ -0.24
Sox4Q06831 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.57□□□□□ -0.24
Sox4Q06831 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sox4Q06831 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox4Q06831 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox4Q06831 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox4Q06831 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Gm37917-201ENSMUST00000194711 392 ntBASIC13.56□□□□□ -0.24
Sox4Q06831 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox4Q06831 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.56□□□□□ -0.24
Sox4Q06831 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox4Q06831 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox4Q06831 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Sox4Q06831 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Sox4Q06831 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Gm5354-201ENSMUST00000182417 973 ntBASIC13.55□□□□□ -0.24
Sox4Q06831 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox4Q06831 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox4Q06831 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox4Q06831 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.55□□□□□ -0.24
Sox4Q06831 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.55□□□□□ -0.24
Sox4Q06831 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox4Q06831 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox4Q06831 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Sox4Q06831 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox4Q06831 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms