Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm14057-201ENSMUST00000120631 482 ntBASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm15487-201ENSMUST00000122373 465 ntBASIC12.13□□□□□ -0.47
Thbs3Q05895 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.13□□□□□ -0.47
Thbs3Q05895 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.13□□□□□ -0.47
Thbs3Q05895 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.13□□□□□ -0.47
Thbs3Q05895 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm20445-201ENSMUST00000061905 565 ntBASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Thbs3Q05895 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.13□□□□□ -0.47
Thbs3Q05895 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.13□□□□□ -0.47
Thbs3Q05895 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Thbs3Q05895 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs3Q05895 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.12□□□□□ -0.47
Thbs3Q05895 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Gm14719-201ENSMUST00000121891 340 ntBASIC12.12□□□□□ -0.47
Thbs3Q05895 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.12□□□□□ -0.47
Thbs3Q05895 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.12□□□□□ -0.47
Thbs3Q05895 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.12□□□□□ -0.47
Thbs3Q05895 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.12□□□□□ -0.47
Thbs3Q05895 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs3Q05895 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs3Q05895 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.11□□□□□ -0.47
Thbs3Q05895 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm9522-201ENSMUST00000182394 926 ntBASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm18905-201ENSMUST00000205454 928 ntBASIC12.11□□□□□ -0.47
Thbs3Q05895 Gm20949-201ENSMUST00000206478 952 ntBASIC12.11□□□□□ -0.47
Thbs3Q05895 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.11□□□□□ -0.47
Thbs3Q05895 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs3Q05895 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms