Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Gm17837-201ENSMUST00000186435 985 ntBASIC14.03□□□□□ -0.16
Gabpb1Q00420 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Gm43703-201ENSMUST00000200523 763 ntBASIC14.03□□□□□ -0.16
Gabpb1Q00420 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gabpb1Q00420 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gm38294-201ENSMUST00000192831 381 ntBASIC14.02□□□□□ -0.17
Gabpb1Q00420 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.02□□□□□ -0.17
Gabpb1Q00420 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.02□□□□□ -0.17
Gabpb1Q00420 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gabpb1Q00420 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Gm6912-201ENSMUST00000117218 544 ntBASIC14.01□□□□□ -0.17
Gabpb1Q00420 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Gm24420-201ENSMUST00000176676 59 ntBASIC14.01□□□□□ -0.17
Gabpb1Q00420 Mir6956-201ENSMUST00000183598 62 ntBASIC14.01□□□□□ -0.17
Gabpb1Q00420 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.01□□□□□ -0.17
Gabpb1Q00420 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabpb1Q00420 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Gabpb1Q00420 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14□□□□□ -0.17
Gabpb1Q00420 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms