Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Smn1P97801 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Smn1P97801 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.82□□□□□ -0.52
Smn1P97801 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.82□□□□□ -0.52
Smn1P97801 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.82□□□□□ -0.52
Smn1P97801 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smn1P97801 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.82□□□□□ -0.52
Smn1P97801 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.82□□□□□ -0.52
Smn1P97801 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.82□□□□□ -0.52
Smn1P97801 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smn1P97801 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smn1P97801 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.82□□□□□ -0.52
Smn1P97801 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smn1P97801 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.82□□□□□ -0.52
Smn1P97801 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smn1P97801 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smn1P97801 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smn1P97801 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.81□□□□□ -0.52
Smn1P97801 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.81□□□□□ -0.52
Smn1P97801 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.81□□□□□ -0.52
Smn1P97801 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.81□□□□□ -0.52
Smn1P97801 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.81□□□□□ -0.52
Smn1P97801 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.81□□□□□ -0.52
Smn1P97801 Gm44608-201ENSMUST00000206827 855 ntBASIC11.81□□□□□ -0.52
Smn1P97801 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.81□□□□□ -0.52
Smn1P97801 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Smn1P97801 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.81□□□□□ -0.52
Smn1P97801 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smn1P97801 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.81□□□□□ -0.52
Smn1P97801 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.8□□□□□ -0.52
Smn1P97801 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smn1P97801 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms