Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.59□□□□□ -0.55
Npas1P97459 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.59□□□□□ -0.55
Npas1P97459 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Npas1P97459 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Npas1P97459 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Npas1P97459 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Npas1P97459 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.59□□□□□ -0.55
Npas1P97459 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Npas1P97459 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Npas1P97459 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Npas1P97459 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Npas1P97459 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.58□□□□□ -0.55
Npas1P97459 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Npas1P97459 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Npas1P97459 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.58□□□□□ -0.56
Npas1P97459 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.58□□□□□ -0.56
Npas1P97459 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Npas1P97459 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.58□□□□□ -0.56
Npas1P97459 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.58□□□□□ -0.56
Npas1P97459 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Npas1P97459 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.58□□□□□ -0.56
Npas1P97459 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Npas1P97459 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Npas1P97459 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.58□□□□□ -0.56
Npas1P97459 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npas1P97459 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Npas1P97459 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.57□□□□□ -0.56
Npas1P97459 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Npas1P97459 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Npas1P97459 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Npas1P97459 Gm24589-201ENSMUST00000116692 94 ntBASIC11.57□□□□□ -0.56
Npas1P97459 Gm8584-201ENSMUST00000171982 758 ntBASIC11.57□□□□□ -0.56
Npas1P97459 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Gm27300-201ENSMUST00000184085 97 ntBASIC11.57□□□□□ -0.56
Npas1P97459 Gm27335-201ENSMUST00000184758 97 ntBASIC11.57□□□□□ -0.56
Npas1P97459 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.57□□□□□ -0.56
Npas1P97459 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Rps4l-201ENSMUST00000071745 943 ntBASIC11.57□□□□□ -0.56
Npas1P97459 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Npas1P97459 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Npas1P97459 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npas1P97459 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms