Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.67□□□□□ -0.22
Crnkl1P63154 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.67□□□□□ -0.22
Crnkl1P63154 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.66□□□□□ -0.22
Crnkl1P63154 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.66□□□□□ -0.22
Crnkl1P63154 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.66□□□□□ -0.22
Crnkl1P63154 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Gm2213-201ENSMUST00000197485 688 ntBASIC13.66□□□□□ -0.22
Crnkl1P63154 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.66□□□□□ -0.22
Crnkl1P63154 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Crnkl1P63154 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crnkl1P63154 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Mir8117-201ENSMUST00000184773 107 ntBASIC13.65□□□□□ -0.22
Crnkl1P63154 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Crnkl1P63154 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.65□□□□□ -0.22
Crnkl1P63154 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.65□□□□□ -0.22
Crnkl1P63154 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Crnkl1P63154 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.65□□□□□ -0.22
Crnkl1P63154 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Crnkl1P63154 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Crnkl1P63154 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.23
Crnkl1P63154 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Crnkl1P63154 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Crnkl1P63154 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.64□□□□□ -0.23
Crnkl1P63154 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Crnkl1P63154 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Crnkl1P63154 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Crnkl1P63154 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Crnkl1P63154 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Crnkl1P63154 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Crnkl1P63154 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Crnkl1P63154 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms