Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pfn1P62962 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.71□□□□□ -0.69
Pfn1P62962 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.71□□□□□ -0.69
Pfn1P62962 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.71□□□□□ -0.69
Pfn1P62962 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pfn1P62962 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.71□□□□□ -0.69
Pfn1P62962 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.71□□□□□ -0.69
Pfn1P62962 Gm6550-201ENSMUST00000187574 993 ntBASIC10.71□□□□□ -0.69
Pfn1P62962 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Gm6376-201ENSMUST00000209407 580 ntBASIC10.71□□□□□ -0.69
Pfn1P62962 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Pfn1P62962 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pfn1P62962 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pfn1P62962 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Rps4l-201ENSMUST00000071745 943 ntBASIC10.71□□□□□ -0.69
Pfn1P62962 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfn1P62962 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pfn1P62962 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pfn1P62962 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Pfn1P62962 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.71□□□□□ -0.7
Pfn1P62962 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.7□□□□□ -0.7
Pfn1P62962 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Pfn1P62962 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.7□□□□□ -0.7
Pfn1P62962 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.7□□□□□ -0.7
Pfn1P62962 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm15173-201ENSMUST00000122049 433 ntBASIC10.7□□□□□ -0.7
Pfn1P62962 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.7□□□□□ -0.7
Pfn1P62962 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pfn1P62962 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.7□□□□□ -0.7
Pfn1P62962 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.7□□□□□ -0.7
Pfn1P62962 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Gm9182-201ENSMUST00000217829 639 ntBASIC10.7□□□□□ -0.7
Pfn1P62962 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pfn1P62962 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pfn1P62962 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pfn1P62962 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfn1P62962 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pfn1P62962 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfn1P62962 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms