Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.11□□□□□ -0.15
Ybx1P62960 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm11803-201ENSMUST00000119966 444 ntBASIC14.11□□□□□ -0.15
Ybx1P62960 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.11□□□□□ -0.15
Ybx1P62960 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.11□□□□□ -0.15
Ybx1P62960 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm8598-201ENSMUST00000221184 836 ntBASIC14.11□□□□□ -0.15
Ybx1P62960 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ybx1P62960 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.11□□□□□ -0.15
Ybx1P62960 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Matn2-206ENSMUST00000228570 2798 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm24644-201ENSMUST00000157114 139 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Gm38223-201ENSMUST00000194484 695 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Gm40466-201ENSMUST00000212174 422 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ybx1P62960 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ybx1P62960 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ybx1P62960 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ybx1P62960 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.1□□□□□ -0.15
Ybx1P62960 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.09□□□□□ -0.15
Ybx1P62960 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Gm15198-201ENSMUST00000117283 177 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Ybx1P62960 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.09□□□□□ -0.15
Ybx1P62960 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.09□□□□□ -0.15
Ybx1P62960 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.09□□□□□ -0.15
Ybx1P62960 Gm27572-201ENSMUST00000183702 255 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ybx1P62960 Gm29741-201ENSMUST00000192667 421 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.09□□□□□ -0.15
Ybx1P62960 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.09□□□□□ -0.15
Ybx1P62960 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ybx1P62960 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms