Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
SmoP56726 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.86□□□□□ -0.19
SmoP56726 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.86□□□□□ -0.19
SmoP56726 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SmoP56726 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.85□□□□□ -0.19
SmoP56726 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SmoP56726 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.85□□□□□ -0.19
SmoP56726 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.85□□□□□ -0.19
SmoP56726 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.85□□□□□ -0.19
SmoP56726 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Gm5161-201ENSMUST00000075243 853 ntBASIC13.85□□□□□ -0.19
SmoP56726 Gm24447-201ENSMUST00000083977 338 ntBASIC13.85□□□□□ -0.19
SmoP56726 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.85□□□□□ -0.19
SmoP56726 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SmoP56726 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SmoP56726 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.84□□□□□ -0.19
SmoP56726 Gm13689-201ENSMUST00000119360 685 ntBASIC13.84□□□□□ -0.19
SmoP56726 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.84□□□□□ -0.19
SmoP56726 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
SmoP56726 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.84□□□□□ -0.19
SmoP56726 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.84□□□□□ -0.19
SmoP56726 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Gm44719-201ENSMUST00000206404 149 ntBASIC13.84□□□□□ -0.19
SmoP56726 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SmoP56726 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.84□□□□□ -0.19
SmoP56726 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SmoP56726 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SmoP56726 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SmoP56726 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
SmoP56726 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.83□□□□□ -0.19
SmoP56726 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SmoP56726 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SmoP56726 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SmoP56726 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms