Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gm11779-201ENSMUST00000118541 368 ntBASIC13.23□□□□□ -0.29
Cdkn2bP55271 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.23□□□□□ -0.29
Cdkn2bP55271 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gm18889-201ENSMUST00000174284 929 ntBASIC13.23□□□□□ -0.29
Cdkn2bP55271 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.23□□□□□ -0.29
Cdkn2bP55271 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdkn2bP55271 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm5566-201ENSMUST00000116118 459 ntBASIC13.22□□□□□ -0.29
Cdkn2bP55271 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm15467-201ENSMUST00000120582 445 ntBASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm9719-201ENSMUST00000162765 543 ntBASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm18766-201ENSMUST00000189811 808 ntBASIC13.22□□□□□ -0.29
Cdkn2bP55271 Gm29541-201ENSMUST00000191351 678 ntBASIC13.22□□□□□ -0.29
Cdkn2bP55271 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.22□□□□□ -0.29
Cdkn2bP55271 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkn2bP55271 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm25287-201ENSMUST00000103846 110 ntBASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm22918-201ENSMUST00000103855 110 ntBASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm9824-201ENSMUST00000178707 561 ntBASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm27494-201ENSMUST00000184735 189 ntBASIC13.21□□□□□ -0.29
Cdkn2bP55271 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.21□□□□□ -0.29
Cdkn2bP55271 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdkn2bP55271 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms