Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.86□□□□□ -0.03
Nub1P54729 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Nub1P54729 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Nub1P54729 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.86□□□□□ -0.03
Nub1P54729 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.86□□□□□ -0.03
Nub1P54729 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Gm9522-201ENSMUST00000182394 926 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nub1P54729 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Gm29741-201ENSMUST00000192667 421 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.86□□□□□ -0.03
Nub1P54729 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.86□□□□□ -0.03
Nub1P54729 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nub1P54729 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nub1P54729 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.85□□□□□ -0.03
Nub1P54729 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.85□□□□□ -0.03
Nub1P54729 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nub1P54729 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nub1P54729 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.85□□□□□ -0.03
Nub1P54729 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Nub1P54729 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nub1P54729 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nub1P54729 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.84□□□□□ -0.03
Nub1P54729 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Gm14057-201ENSMUST00000120631 482 ntBASIC14.84□□□□□ -0.03
Nub1P54729 Gm15321-201ENSMUST00000121290 288 ntBASIC14.84□□□□□ -0.03
Nub1P54729 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.84□□□□□ -0.03
Nub1P54729 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.84□□□□□ -0.03
Nub1P54729 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Gm4804-201ENSMUST00000182234 999 ntBASIC14.84□□□□□ -0.03
Nub1P54729 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nub1P54729 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms