Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Fdft1P53798 Gm8410-201ENSMUST00000117225 605 ntBASIC13.82□□□□□ -0.2
Fdft1P53798 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.82□□□□□ -0.2
Fdft1P53798 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.82□□□□□ -0.2
Fdft1P53798 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.82□□□□□ -0.2
Fdft1P53798 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.81□□□□□ -0.2
Fdft1P53798 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Fdft1P53798 Dupd1-202ENSMUST00000224735 548 ntBASIC13.81□□□□□ -0.2
Fdft1P53798 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Fdft1P53798 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.81□□□□□ -0.2
Fdft1P53798 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Fdft1P53798 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Fdft1P53798 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fdft1P53798 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Fdft1P53798 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Fdft1P53798 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Fdft1P53798 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.8□□□□□ -0.2
Fdft1P53798 Gm24543-201ENSMUST00000103867 82 ntBASIC13.8□□□□□ -0.2
Fdft1P53798 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Fdft1P53798 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.8□□□□□ -0.2
Fdft1P53798 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.8□□□□□ -0.2
Fdft1P53798 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms