Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Gm16215-201ENSMUST00000161990 637 ntBASIC13.65□□□□□ -0.22
Pdx1P52946 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdx1P52946 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.65□□□□□ -0.22
Pdx1P52946 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.65□□□□□ -0.22
Pdx1P52946 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdx1P52946 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdx1P52946 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
Pdx1P52946 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.65□□□□□ -0.22
Pdx1P52946 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Pdx1P52946 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.65□□□□□ -0.23
Pdx1P52946 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pdx1P52946 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdx1P52946 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.64□□□□□ -0.23
Pdx1P52946 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdx1P52946 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.64□□□□□ -0.23
Pdx1P52946 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.64□□□□□ -0.23
Pdx1P52946 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pdx1P52946 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.64□□□□□ -0.23
Pdx1P52946 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdx1P52946 Gm5425-201ENSMUST00000214125 459 ntBASIC13.64□□□□□ -0.23
Pdx1P52946 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.64□□□□□ -0.23
Pdx1P52946 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pdx1P52946 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pdx1P52946 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdx1P52946 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Pdx1P52946 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Gm17795-201ENSMUST00000214505 757 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Gm9797-201ENSMUST00000052902 613 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.63□□□□□ -0.23
Pdx1P52946 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.63□□□□□ -0.23
Pdx1P52946 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pdx1P52946 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdx1P52946 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms