Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.58□□□□□ -0.08
Shmt1P50431 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.58□□□□□ -0.08
Shmt1P50431 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.58□□□□□ -0.08
Shmt1P50431 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.58□□□□□ -0.08
Shmt1P50431 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.58□□□□□ -0.08
Shmt1P50431 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.58□□□□□ -0.08
Shmt1P50431 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.58□□□□□ -0.08
Shmt1P50431 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.58□□□□□ -0.08
Shmt1P50431 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Shmt1P50431 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Shmt1P50431 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.58□□□□□ -0.08
Shmt1P50431 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Shmt1P50431 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Shmt1P50431 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shmt1P50431 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Shmt1P50431 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Shmt1P50431 Gm26464-201ENSMUST00000157094 305 ntBASIC14.57□□□□□ -0.08
Shmt1P50431 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shmt1P50431 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.57□□□□□ -0.08
Shmt1P50431 Gm45384-201ENSMUST00000210451 277 ntBASIC14.57□□□□□ -0.08
Shmt1P50431 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.57□□□□□ -0.08
Shmt1P50431 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.57□□□□□ -0.08
Shmt1P50431 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shmt1P50431 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Shmt1P50431 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Shmt1P50431 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Shmt1P50431 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Shmt1P50431 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.56□□□□□ -0.08
Shmt1P50431 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Gm11524-201ENSMUST00000119349 807 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.56□□□□□ -0.08
Shmt1P50431 Mir7654-201ENSMUST00000185082 70 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 Gm18187-201ENSMUST00000196476 984 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.56□□□□□ -0.08
Shmt1P50431 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.56□□□□□ -0.08
Shmt1P50431 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Shmt1P50431 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shmt1P50431 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Shmt1P50431 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Shmt1P50431 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Shmt1P50431 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shmt1P50431 Gm27772-201ENSMUST00000184900 187 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms