Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Rfx3P48381 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfx3P48381 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rfx3P48381 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfx3P48381 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.48□□□□□ -0.41
Rfx3P48381 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rfx3P48381 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rfx3P48381 Gm15957-201ENSMUST00000118893 974 ntBASIC12.48□□□□□ -0.41
Rfx3P48381 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.48□□□□□ -0.41
Rfx3P48381 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.48□□□□□ -0.41
Rfx3P48381 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rfx3P48381 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rfx3P48381 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rfx3P48381 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfx3P48381 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rfx3P48381 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rfx3P48381 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rfx3P48381 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rfx3P48381 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.47□□□□□ -0.41
Rfx3P48381 Gm6222-201ENSMUST00000120787 396 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.47□□□□□ -0.41
Rfx3P48381 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rfx3P48381 Gm26308-201ENSMUST00000157768 69 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rfx3P48381 AA619741-201ENSMUST00000195095 646 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Gm44335-201ENSMUST00000196879 141 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Gm44297-201ENSMUST00000198304 141 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Gm44346-201ENSMUST00000198851 141 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.47□□□□□ -0.41
Rfx3P48381 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.47□□□□□ -0.41
Rfx3P48381 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rfx3P48381 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rfx3P48381 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.47□□□□□ -0.41
Rfx3P48381 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfx3P48381 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfx3P48381 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfx3P48381 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Rfx3P48381 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms