Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps4bP46467 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps4bP46467 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Acot6-202ENSMUST00000222921 3622 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 Mir7023-201ENSMUST00000185093 64 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Gm29541-201ENSMUST00000191351 678 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Gm43474-201ENSMUST00000196415 774 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Gm44335-201ENSMUST00000196879 141 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Gm44297-201ENSMUST00000198304 141 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Gm44346-201ENSMUST00000198851 141 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.01□□□□□ -0.17
Vps4bP46467 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps4bP46467 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps4bP46467 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps4bP46467 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14□□□□□ -0.17
Vps4bP46467 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps4bP46467 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps4bP46467 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14□□□□□ -0.17
Vps4bP46467 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14□□□□□ -0.17
Vps4bP46467 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps4bP46467 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps4bP46467 Dupd1-202ENSMUST00000224735 548 ntBASIC14□□□□□ -0.17
Vps4bP46467 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps4bP46467 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms