Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.34□□□□□ -0.11
HttP42859 Gm27046-201ENSMUST00000182160 463 ntBASIC14.34□□□□□ -0.11
HttP42859 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.34□□□□□ -0.11
HttP42859 Gm6458-201ENSMUST00000211573 635 ntBASIC14.34□□□□□ -0.11
HttP42859 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.34□□□□□ -0.11
HttP42859 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HttP42859 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.34□□□□□ -0.11
HttP42859 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.34□□□□□ -0.11
HttP42859 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HttP42859 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.34□□□□□ -0.11
HttP42859 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.34□□□□□ -0.11
HttP42859 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.33□□□□□ -0.11
HttP42859 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.33□□□□□ -0.11
HttP42859 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HttP42859 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HttP42859 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HttP42859 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HttP42859 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HttP42859 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
HttP42859 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HttP42859 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HttP42859 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HttP42859 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.33□□□□□ -0.12
HttP42859 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.33□□□□□ -0.12
HttP42859 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.33□□□□□ -0.12
HttP42859 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.33□□□□□ -0.12
HttP42859 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.33□□□□□ -0.12
HttP42859 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HttP42859 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HttP42859 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.33□□□□□ -0.12
HttP42859 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HttP42859 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
HttP42859 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.33□□□□□ -0.12
HttP42859 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HttP42859 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HttP42859 Gm11930-201ENSMUST00000117788 190 ntBASIC14.32□□□□□ -0.12
HttP42859 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.32□□□□□ -0.12
HttP42859 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.32□□□□□ -0.12
HttP42859 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.32□□□□□ -0.12
HttP42859 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.32□□□□□ -0.12
HttP42859 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.32□□□□□ -0.12
HttP42859 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.32□□□□□ -0.12
HttP42859 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HttP42859 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Gm13611-201ENSMUST00000118269 318 ntBASIC14.32□□□□□ -0.12
HttP42859 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HttP42859 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.32□□□□□ -0.12
HttP42859 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HttP42859 Gm2546-201ENSMUST00000182630 991 ntBASIC14.32□□□□□ -0.12
HttP42859 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.32□□□□□ -0.12
HttP42859 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.32□□□□□ -0.12
HttP42859 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HttP42859 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HttP42859 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HttP42859 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Daam2-202ENSMUST00000224595 1926 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms