Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.12□□□□□ -0.15
Cxcl12P40224 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.12□□□□□ -0.15
Cxcl12P40224 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl12P40224 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Gm11222-201ENSMUST00000119005 738 ntBASIC14.11□□□□□ -0.15
Cxcl12P40224 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Gm7809-201ENSMUST00000153199 742 ntBASIC14.11□□□□□ -0.15
Cxcl12P40224 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl12P40224 Mir6979-201ENSMUST00000183927 56 ntBASIC14.11□□□□□ -0.15
Cxcl12P40224 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.11□□□□□ -0.15
Cxcl12P40224 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.11□□□□□ -0.15
Cxcl12P40224 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cxcl12P40224 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl12P40224 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl12P40224 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl12P40224 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Gm14017-201ENSMUST00000121934 386 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 Gm13123-201ENSMUST00000122173 492 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 Gm24990-201ENSMUST00000157406 323 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.1□□□□□ -0.15
Cxcl12P40224 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl12P40224 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl12P40224 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms