Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm38210-201ENSMUST00000191944 809 ntBASIC20.26■□□□□ 0.83
Chd1P40201 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Chd1P40201 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Chd1P40201 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Chd1P40201 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Chd1P40201 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd1P40201 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1P40201 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Gm7666-201ENSMUST00000146631 819 ntBASIC20.24■□□□□ 0.83
Chd1P40201 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Gm38092-201ENSMUST00000195600 653 ntBASIC20.24■□□□□ 0.83
Chd1P40201 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC20.24■□□□□ 0.83
Chd1P40201 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 AC166992.1-201ENSMUST00000216356 565 ntBASIC20.24■□□□□ 0.83
Chd1P40201 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Chd1P40201 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Chd1P40201 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Chd1P40201 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1P40201 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC20.24■□□□□ 0.83
Chd1P40201 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Chd1P40201 Gm43916-201ENSMUST00000205062 967 ntBASIC20.24■□□□□ 0.83
Chd1P40201 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC20.24■□□□□ 0.83
Chd1P40201 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd1P40201 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC20.23■□□□□ 0.83
Chd1P40201 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC20.23■□□□□ 0.83
Chd1P40201 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd1P40201 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd1P40201 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd1P40201 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chd1P40201 Gm25517-201ENSMUST00000083865 134 ntBASIC20.23■□□□□ 0.83
Chd1P40201 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chd1P40201 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Chd1P40201 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd1P40201 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1P40201 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chd1P40201 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC20.22■□□□□ 0.83
Chd1P40201 Gm6161-201ENSMUST00000121942 1102 ntBASIC20.22■□□□□ 0.83
Chd1P40201 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC20.22■□□□□ 0.83
Chd1P40201 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Chd1P40201 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Gm6153-201ENSMUST00000172004 1058 ntBASIC20.22■□□□□ 0.83
Chd1P40201 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chd1P40201 Gm32999-201ENSMUST00000192693 562 ntBASIC20.22■□□□□ 0.83
Chd1P40201 Gm5641-202ENSMUST00000198699 1080 ntBASIC20.22■□□□□ 0.83
Chd1P40201 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC20.22■□□□□ 0.83
Chd1P40201 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chd1P40201 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chd1P40201 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chd1P40201 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chd1P40201 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1P40201 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms