Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdh4P39038 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdh4P39038 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh4P39038 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdh4P39038 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.23□□□□□ -0.29
Cdh4P39038 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh4P39038 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh4P39038 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh4P39038 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdh4P39038 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.22□□□□□ -0.29
Cdh4P39038 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdh4P39038 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdh4P39038 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Gm5866-201ENSMUST00000177881 973 ntBASIC13.22□□□□□ -0.29
Cdh4P39038 Gm21854-201ENSMUST00000179901 471 ntBASIC13.22□□□□□ -0.29
Cdh4P39038 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Gm44855-201ENSMUST00000205725 362 ntBASIC13.22□□□□□ -0.29
Cdh4P39038 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Syt7-205ENSMUST00000224135 1557 ntBASIC13.22□□□□□ -0.29
Cdh4P39038 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.22□□□□□ -0.29
Cdh4P39038 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh4P39038 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh4P39038 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Cdh4P39038 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Cdh4P39038 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.21□□□□□ -0.29
Cdh4P39038 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Gm9797-201ENSMUST00000052902 613 ntBASIC13.21□□□□□ -0.29
Cdh4P39038 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdh4P39038 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh4P39038 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh4P39038 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh4P39038 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh4P39038 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.21□□□□□ -0.3
Cdh4P39038 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.21□□□□□ -0.3
Cdh4P39038 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh4P39038 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Cdh4P39038 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms