Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.79□□□□□ -0.36
BgnP28653 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.79□□□□□ -0.36
BgnP28653 Gm27300-201ENSMUST00000184085 97 ntBASIC12.79□□□□□ -0.36
BgnP28653 Gm27335-201ENSMUST00000184758 97 ntBASIC12.79□□□□□ -0.36
BgnP28653 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.79□□□□□ -0.36
BgnP28653 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.79□□□□□ -0.36
BgnP28653 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.79□□□□□ -0.36
BgnP28653 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.79□□□□□ -0.36
BgnP28653 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BgnP28653 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BgnP28653 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.78□□□□□ -0.36
BgnP28653 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.78□□□□□ -0.36
BgnP28653 Gm13597-201ENSMUST00000121239 375 ntBASIC12.78□□□□□ -0.36
BgnP28653 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.78□□□□□ -0.36
BgnP28653 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Mir7071-201ENSMUST00000184847 69 ntBASIC12.78□□□□□ -0.36
BgnP28653 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.78□□□□□ -0.36
BgnP28653 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
BgnP28653 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.78□□□□□ -0.36
BgnP28653 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BgnP28653 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BgnP28653 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
BgnP28653 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
BgnP28653 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BgnP28653 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Gm7153-201ENSMUST00000117092 455 ntBASIC12.77□□□□□ -0.37
BgnP28653 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Gm2445-201ENSMUST00000182798 989 ntBASIC12.77□□□□□ -0.37
BgnP28653 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
BgnP28653 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BgnP28653 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
BgnP28653 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
BgnP28653 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
BgnP28653 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
BgnP28653 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
BgnP28653 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BgnP28653 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BgnP28653 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BgnP28653 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms