Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Gm25007-201ENSMUST00000083808 133 ntBASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm42612-201ENSMUST00000197986 623 ntBASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm43170-201ENSMUST00000199827 612 ntBASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm18905-201ENSMUST00000205454 928 ntBASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1bP25119 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1bP25119 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1bP25119 Gm22189-201ENSMUST00000103822 86 ntBASIC12.77□□□□□ -0.37
Tnfrsf1bP25119 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms