Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd8P23463 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd8P23463 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.16□□□□□ -0.14
Hoxd8P23463 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.16□□□□□ -0.14
Hoxd8P23463 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.16□□□□□ -0.14
Hoxd8P23463 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.16□□□□□ -0.14
Hoxd8P23463 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.16□□□□□ -0.14
Hoxd8P23463 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.16□□□□□ -0.14
Hoxd8P23463 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxd8P23463 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd8P23463 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.15□□□□□ -0.14
Hoxd8P23463 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.15□□□□□ -0.14
Hoxd8P23463 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Gm16372-201ENSMUST00000073088 450 ntBASIC14.15□□□□□ -0.14
Hoxd8P23463 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxd8P23463 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd8P23463 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.15□□□□□ -0.15
Hoxd8P23463 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.15□□□□□ -0.15
Hoxd8P23463 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxd8P23463 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd8P23463 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxd8P23463 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxd8P23463 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxd8P23463 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.14□□□□□ -0.15
Hoxd8P23463 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.14□□□□□ -0.15
Hoxd8P23463 Gm37466-201ENSMUST00000195692 652 ntBASIC14.14□□□□□ -0.15
Hoxd8P23463 Gm19184-201ENSMUST00000196798 928 ntBASIC14.14□□□□□ -0.15
Hoxd8P23463 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.14□□□□□ -0.15
Hoxd8P23463 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.14□□□□□ -0.15
Hoxd8P23463 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms