Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf9P20334 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Gm9522-201ENSMUST00000182394 926 ntBASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Gm6266-201ENSMUST00000203844 806 ntBASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf9P20334 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm37917-201ENSMUST00000194711 392 ntBASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm43703-201ENSMUST00000200523 763 ntBASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm43630-201ENSMUST00000201550 776 ntBASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Thoc7-209ENSMUST00000225325 765 ntBASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf9P20334 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms