Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.24□□□□□ -0.29
Cntn1P12960 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cntn1P12960 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cntn1P12960 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.24□□□□□ -0.29
Cntn1P12960 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Cntn1P12960 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Cntn1P12960 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.23□□□□□ -0.29
Cntn1P12960 Gm24420-201ENSMUST00000176676 59 ntBASIC13.23□□□□□ -0.29
Cntn1P12960 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.23□□□□□ -0.29
Cntn1P12960 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.23□□□□□ -0.29
Cntn1P12960 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.23□□□□□ -0.29
Cntn1P12960 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cntn1P12960 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cntn1P12960 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.22□□□□□ -0.29
Cntn1P12960 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cntn1P12960 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cntn1P12960 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Cntn1P12960 Gm45384-201ENSMUST00000210451 277 ntBASIC13.22□□□□□ -0.29
Cntn1P12960 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.22□□□□□ -0.29
Cntn1P12960 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Cntn1P12960 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.22□□□□□ -0.29
Cntn1P12960 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cntn1P12960 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cntn1P12960 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Cntn1P12960 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.21□□□□□ -0.29
Cntn1P12960 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.21□□□□□ -0.29
Cntn1P12960 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.21□□□□□ -0.29
Cntn1P12960 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms