Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.95■□□□□ 0.14
Col1a1P11087 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.95■□□□□ 0.14
Col1a1P11087 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col1a1P11087 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.95■□□□□ 0.14
Col1a1P11087 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col1a1P11087 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Col1a1P11087 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col1a1P11087 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col1a1P11087 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
Col1a1P11087 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.94■□□□□ 0.14
Col1a1P11087 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col1a1P11087 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col1a1P11087 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Col1a1P11087 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.94■□□□□ 0.14
Col1a1P11087 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.94■□□□□ 0.14
Col1a1P11087 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.94■□□□□ 0.14
Col1a1P11087 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.94■□□□□ 0.14
Col1a1P11087 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col1a1P11087 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.93■□□□□ 0.14
Col1a1P11087 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Col1a1P11087 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.93■□□□□ 0.14
Col1a1P11087 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.93■□□□□ 0.14
Col1a1P11087 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.93■□□□□ 0.14
Col1a1P11087 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.93■□□□□ 0.14
Col1a1P11087 Rps4l-202ENSMUST00000204242 789 ntBASIC15.93■□□□□ 0.14
Col1a1P11087 Morn2-202ENSMUST00000227729 656 ntBASIC15.93■□□□□ 0.14
Col1a1P11087 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Col1a1P11087 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.93■□□□□ 0.14
Col1a1P11087 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.93■□□□□ 0.14
Col1a1P11087 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.93■□□□□ 0.14
Col1a1P11087 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.93■□□□□ 0.14
Col1a1P11087 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col1a1P11087 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.92■□□□□ 0.14
Col1a1P11087 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col1a1P11087 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col1a1P11087 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col1a1P11087 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col1a1P11087 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col1a1P11087 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.92■□□□□ 0.14
Col1a1P11087 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.92■□□□□ 0.14
Col1a1P11087 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col1a1P11087 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col1a1P11087 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col1a1P11087 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col1a1P11087 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms