Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccl3P10855 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccl3P10855 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccl3P10855 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ccl3P10855 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm22018-201ENSMUST00000104357 131 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm13369-201ENSMUST00000119442 987 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm12403-201ENSMUST00000121384 959 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccl3P10855 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm2445-201ENSMUST00000182798 989 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccl3P10855 Mir8109-201ENSMUST00000184375 117 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccl3P10855 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccl3P10855 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccl3P10855 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl3P10855 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.13□□□□□ -0.47
Ccl3P10855 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccl3P10855 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.12□□□□□ -0.47
Ccl3P10855 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccl3P10855 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccl3P10855 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccl3P10855 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Gm43822-201ENSMUST00000200285 476 ntBASIC12.12□□□□□ -0.47
Ccl3P10855 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccl3P10855 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccl3P10855 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.12□□□□□ -0.47
Ccl3P10855 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccl3P10855 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl3P10855 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms