Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.88□□□□□ -0.03
Vti1aO89116 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.88□□□□□ -0.03
Vti1aO89116 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.88□□□□□ -0.03
Vti1aO89116 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vti1aO89116 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.88□□□□□ -0.03
Vti1aO89116 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.88□□□□□ -0.03
Vti1aO89116 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.88□□□□□ -0.03
Vti1aO89116 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vti1aO89116 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.88□□□□□ -0.03
Vti1aO89116 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Vti1aO89116 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.88□□□□□ -0.03
Vti1aO89116 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vti1aO89116 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.88□□□□□ -0.03
Vti1aO89116 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1aO89116 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.87□□□□□ -0.03
Vti1aO89116 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
Vti1aO89116 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vti1aO89116 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.87□□□□□ -0.03
Vti1aO89116 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.87□□□□□ -0.03
Vti1aO89116 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.87□□□□□ -0.03
Vti1aO89116 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.87□□□□□ -0.03
Vti1aO89116 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vti1aO89116 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.87□□□□□ -0.03
Vti1aO89116 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.87□□□□□ -0.03
Vti1aO89116 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1aO89116 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vti1aO89116 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vti1aO89116 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.86□□□□□ -0.03
Vti1aO89116 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.86□□□□□ -0.03
Vti1aO89116 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.86□□□□□ -0.03
Vti1aO89116 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.86□□□□□ -0.03
Vti1aO89116 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.86□□□□□ -0.03
Vti1aO89116 Gm5035-201ENSMUST00000215581 927 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Gm5356-201ENSMUST00000093326 615 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.86□□□□□ -0.03
Vti1aO89116 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vti1aO89116 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms