Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm10275-201ENSMUST00000092620 635 ntBASIC13.26□□□□□ -0.29
Hcn1O88704 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Gm24543-201ENSMUST00000103867 82 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 Gm14042-201ENSMUST00000120139 833 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Gm27533-201ENSMUST00000183800 152 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 Gm17837-201ENSMUST00000186435 985 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Gm6888-201ENSMUST00000221983 706 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.25□□□□□ -0.29
Hcn1O88704 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Hcn1O88704 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hcn1O88704 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Hcn1O88704 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.24□□□□□ -0.29
Hcn1O88704 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hcn1O88704 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hcn1O88704 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Hcn1O88704 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Gm27631-201ENSMUST00000184163 466 ntBASIC13.24□□□□□ -0.29
Hcn1O88704 Mir7023-201ENSMUST00000185093 64 ntBASIC13.24□□□□□ -0.29
Hcn1O88704 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.24□□□□□ -0.29
Hcn1O88704 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.24□□□□□ -0.29
Hcn1O88704 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hcn1O88704 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hcn1O88704 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.24□□□□□ -0.29
Hcn1O88704 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Hcn1O88704 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hcn1O88704 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hcn1O88704 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hcn1O88704 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.24□□□□□ -0.29
Hcn1O88704 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hcn1O88704 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hcn1O88704 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms