Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ClppO88696 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ClppO88696 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
ClppO88696 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ClppO88696 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ClppO88696 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.54□□□□□ -0.24
ClppO88696 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ClppO88696 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClppO88696 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ClppO88696 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ClppO88696 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ClppO88696 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.54□□□□□ -0.24
ClppO88696 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ClppO88696 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.53□□□□□ -0.24
ClppO88696 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Gm33320-201ENSMUST00000192232 530 ntBASIC13.53□□□□□ -0.24
ClppO88696 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ClppO88696 Gm8515-201ENSMUST00000194852 576 ntBASIC13.53□□□□□ -0.24
ClppO88696 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.53□□□□□ -0.24
ClppO88696 Gm9794-201ENSMUST00000202370 423 ntBASIC13.53□□□□□ -0.24
ClppO88696 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.53□□□□□ -0.24
ClppO88696 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.53□□□□□ -0.24
ClppO88696 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClppO88696 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
ClppO88696 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ClppO88696 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
ClppO88696 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClppO88696 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.52□□□□□ -0.24
ClppO88696 Gm14042-201ENSMUST00000120139 833 ntBASIC13.52□□□□□ -0.25
ClppO88696 Gm15393-201ENSMUST00000120499 219 ntBASIC13.52□□□□□ -0.25
ClppO88696 Gm12882-201ENSMUST00000121696 517 ntBASIC13.52□□□□□ -0.25
ClppO88696 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClppO88696 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.52□□□□□ -0.25
ClppO88696 Gm21854-201ENSMUST00000179901 471 ntBASIC13.52□□□□□ -0.25
ClppO88696 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClppO88696 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.52□□□□□ -0.25
ClppO88696 Gm6218-201ENSMUST00000219812 628 ntBASIC13.52□□□□□ -0.25
ClppO88696 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ClppO88696 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ClppO88696 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.52□□□□□ -0.25
ClppO88696 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClppO88696 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClppO88696 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms